The UMD software

 


Mutability:
We defined this new parameter as follows: for each base, the number of relevant substitutions (leading to AA change) is evaluated (0–3) and values for the three bases of a specific codon are added:

AAA

8

AAC

8

AAG

8

AAT

8

ACA

8

ACC

8

ACG

8

ACT

8

AGA

8

AGC

8

AGG

7

AGT

8

ATA

7

ATC

7

ATG

9

ATT

7

TAA

8

TAC

8

TAG

8

TAT

8

TCA

6

TCC

6

TCG

6

TCT

6

TGA

8

TGC

8

TGG

9

TGT

8

TTA

8

TTC

8

TTG

8

TTT

8

GAA

8

GAC

8

GAG

8

GAT

8

GCA

6

GCC

6

GCG

6

GCT

6

GGA

6

GGC

6

GGG

6

GGT

6

GTA

6

GTC

6

GTG

6

GTT

6

CAA

8

CAC

8

CAG

8

CAT

8

CCA

6

CCC

6

CCG

6

CCT

6

CGA

5

CGC

6

CGG

5

CGT

6

CTA

5

CTC

6

CTG

5

CTT

6